EnhancerDB
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  3. rs540477449[chr12:124865391]
Enhancers that have rs540477449[chr12:124865391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124862183 124886902 enh2671
Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs540477449[chr12:124865391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124861015 124865473 ZNF274 GTRD no Bone Marrow (K562) 108067419
chr12 124864948 124865502 ZNF274 GTRD no Bone Marrow (K562) 108067456
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 21580388
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067457
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067458
chr12 124865277 124866436 ZNF143 GTRD no Epithelial (MCF-7) 21580389
chr12 124865277 124866436 ZNF143 GTRD no Epithelial (MCF-7) 108067459
chr12 124865380 124865397 BCL6B JASPAR yes 124371782
chr12 124865389 124865395 SOX10 JASPAR yes 124371784
Genes associated with rs540477449[chr12:124865391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More