EnhancerDB
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  3. rs540486425[chr1:172505620]
Enhancers that have rs540486425[chr1:172505620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172503525 172518495 enh728
Prostate (PC-3) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs540486425[chr1:172505620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172501367 172507799 ZNF274 GTRD no Bone Marrow (K562) 107845854
chr1 172505607 172505620 JUN JASPAR yes 33135374
chr1 172505619 172505623 YY1 TRANSFAC yes 33135376
Genes associated with rs540486425[chr1:172505620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More