EnhancerDB
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  3. rs540489779[chr3:122702520]
Enhancers that have rs540489779[chr3:122702520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 122686605 122709095 enh20858
Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs540489779[chr3:122702520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 122702513 122702521 NR4A2 JASPAR yes 5293475
chr3 122702516 122702526 SREBF1 JASPAR yes 5293476
chr3 122702516 122702526 SREBF2 JASPAR yes 5293477
Genes associated with rs540489779[chr3:122702520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More