EnhancerDB
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  3. rs540492598[chr2:204438710]
Enhancers that have rs540492598[chr2:204438710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs540492598[chr2:204438710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204438706 204438717 YY2 JASPAR yes 80240948
chr2 204438709 204438720 HOXA10 JASPAR yes 80240949
Genes associated with rs540492598[chr2:204438710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More