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- rs540500962[chr16:85489380]
Enhancers that have rs540500962[chr16:85489380]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
85477350 |
85511195 |
enh16870 |
|
|
Transcript factors that have rs540500962[chr16:85489380]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
85488334
|
85492516
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21726100
|
|
|
chr16
|
85489146
|
85489456
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
21726101
|
|
|
chr16
|
85489197
|
85490806
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21726102
|
|
|
chr16
|
85489221
|
85490810
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21726103
|
|
|
chr16
|
85489363
|
85489383
|
PPARG
|
JASPAR
|
yes
|
|
12063480
|
|
|
chr16
|
85489365
|
85489383
|
ESR2
|
JASPAR
|
yes
|
|
12063482
|
|
|
chr16
|
85489366
|
85489381
|
ESR2
|
JASPAR
|
yes
|
|
12063483
|
|
|
chr16
|
85489374
|
85489385
|
FOSL2
|
JASPAR
|
yes
|
|
12063485
|
|
Genes associated with rs540500962[chr16:85489380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |