EnhancerDB
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  3. rs540503899[chr1:151973842]
Enhancers that have rs540503899[chr1:151973842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151965505 151978042 enh27136
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Thyroid Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 151973450 151973865 vista3311
VISTA
Transcript factors that have rs540503899[chr1:151973842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151971968 151974424 ZBTB33 GTRD no Lung (A549) 107830580
chr1 151972036 151974410 ZBTB33 GTRD no Lung (A549) 107830581
chr1 151972161 151974153 ZBTB33 GTRD no Lung (A549) 107830583
chr1 151972245 151974294 ZBTB33 GTRD no Lung (A549) 107830589
chr1 151972286 151974269 ZBTB33 GTRD no Lung (A549) 107830594
chr1 151972321 151974042 ZNF274 GTRD no Cervix (HeLa-S3) 21338954
chr1 151972321 151974042 ZNF274 GTRD no Cervix (HeLa-S3) 107830597
chr1 151972334 151974414 ZBTB33 GTRD no Lung (A549) 107830599
chr1 151972401 151974280 ZBTB33 GTRD no Lung (A549) 107830607
chr1 151972402 151973902 ZBTB33 GTRD no Lung (A549) 107830608
chr1 151972568 151974099 ZBTB33 GTRD no Lung (A549) 107830616
chr1 151973824 151973844 TP53 JASPAR yes 32211948
chr1 151973824 151973844 TP53 JASPAR yes 118369720
chr1 151973829 151973847 NR3C1 JASPAR yes 32211949
chr1 151973829 151973847 NR3C1 JASPAR yes 118369721
chr1 151973842 151973849 NFATC2 JASPAR yes 32211950
chr1 151973842 151973849 NFATC2 JASPAR yes 118369722
Genes associated with rs540503899[chr1:151973842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More