EnhancerDB
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  3. rs540519421[chr2:236524455]
Enhancers that have rs540519421[chr2:236524455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236499845 236529222 enh19367
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs540519421[chr2:236524455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236524436 236524457 IRF1 JASPAR yes 81986393
chr2 236524440 236524455 PRDM1 JASPAR yes 81986394
Genes associated with rs540519421[chr2:236524455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More