EnhancerDB
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  3. rs540537670[chr12:124933929]
Enhancers that have rs540537670[chr12:124933929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124915816 124950275 enh2672
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540537670[chr12:124933929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124933922 124933932 FIGLA JASPAR yes 124379443
chr12 124933922 124933933 USF2 JASPAR yes 124379444
chr12 124933925 124933938 NFKB1 JASPAR yes 124379445
chr12 124933928 124933948 TP53 JASPAR yes 124379446
Genes associated with rs540537670[chr12:124933929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More