EnhancerDB
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  3. rs540545671[chr12:48217478]
Enhancers that have rs540545671[chr12:48217478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs540545671[chr12:48217478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48217457 48217478 ZNF263 JASPAR yes 120719723
chr12 48217458 48217479 IRF1 JASPAR yes 120719724
chr12 48217460 48217481 ZNF263 JASPAR yes 120719725
chr12 48217463 48217484 ZNF263 JASPAR yes 120719726
chr12 48217464 48217485 ZNF263 JASPAR yes 120719727
chr12 48217474 48217479 ETS2 TRANSFAC yes 120719728
chr12 48217474 48217482 EHF JASPAR yes 120719729
chr12 48217478 48217483 ETS2 TRANSFAC yes 120719730
Genes associated with rs540545671[chr12:48217478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More