EnhancerDB
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  3. rs540551888[chr14:51999965]
Enhancers that have rs540551888[chr14:51999965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 51997724 52003715 enh15603
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Breast Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
chr14 51999901 52000168 vista17724
VISTA
Transcript factors that have rs540551888[chr14:51999965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 51998949 52000658 ZBTB33 GTRD no Brain (SK-N-SH) 108101430
chr14 51998954 52000598 ZBTB33 GTRD no Brain (SK-N-SH) 108101431
chr14 51999761 52000597 ZBTB33 GTRD no Brain (SK-N-SH) 108101432
chr14 51999826 52000366 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108101433
chr14 51999829 52001670 AR GTRD no Prostate (PC-3) 21617248
chr14 51999829 52001670 AR GTRD no Prostate (PC-3) 108101434
chr14 51999844 52000174 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21617249
chr14 51999844 52000174 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108101435
chr14 51999872 52000526 ZBTB33 GTRD no Brain (SK-N-SH) 108101436
chr14 51999880 52000396 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21617250
chr14 51999880 52000396 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108101437
chr14 51999880 52000410 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21617251
chr14 51999880 52000410 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108101438
chr14 51999882 52000528 ZBTB33 GTRD no Brain (SK-N-SH) 108101439
chr14 51999889 52000504 ZBTB33 GTRD no Brain (SK-N-SH) 108101440
chr14 51999892 52000236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21617252
chr14 51999892 52000236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108101441
chr14 51999900 52000344 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108101442
chr14 51999907 52000345 ZBTB33 GTRD no Brain (SK-N-SH) 108101443
chr14 51999919 52000652 ZBTB33 GTRD no Brain (SK-N-SH) 108101444
chr14 51999944 52000553 ZBTB33 GTRD no Brain (SK-N-SH) 108101445
chr14 51999948 51999968 RREB1 JASPAR yes 107546072
chr14 51999948 51999968 RREB1 JASPAR yes 115311454
chr14 51999948 52000499 ZBTB33 GTRD no Brain (SK-N-SH) 108101446
chr14 51999950 51999970 RREB1 JASPAR yes 107546073
chr14 51999950 51999970 RREB1 JASPAR yes 115311455
chr14 51999963 51999968 SP1 TRANSFAC yes 107546074
chr14 51999963 51999968 SP1 TRANSFAC yes 115311456
chr14 51999965 52000285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21617253
chr14 51999965 52000285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108101447
Genes associated with rs540551888[chr14:51999965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More