EnhancerDB
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  3. rs540561259[chr2:240230370]
Enhancers that have rs540561259[chr2:240230370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240228385 240255618 enh45047
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs540561259[chr2:240230370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240230363 240230376 NFKB1 JASPAR yes 82228863
chr2 240230363 240230376 NFKB2 JASPAR yes 82228864
Genes associated with rs540561259[chr2:240230370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More