EnhancerDB
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  3. rs540562165[chr1:228076883]
Enhancers that have rs540562165[chr1:228076883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540562165[chr1:228076883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228075015 228076890 ZNF274 GTRD no Blood (GM12878) 107876791
chr1 228076455 228076890 ZNF274 GTRD no Bone Marrow (K562) 21388295
chr1 228076515 228076919 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388296
chr1 228076601 228076965 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388297
chr1 228076640 228076944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388298
chr1 228076642 228076966 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388299
chr1 228076652 228076908 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388300
chr1 228076686 228076926 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388301
chr1 228076687 228077057 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388302
chr1 228076692 228076962 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388303
chr1 228076824 228077739 ZNF274 GTRD no Bone Marrow (K562) 21388306
chr1 228076868 228076885 RXRA JASPAR yes 35890949
chr1 228076875 228076896 ZNF263 JASPAR yes 35890950
chr1 228076880 228076890 SP1 JASPAR yes 35890951
chr1 228076880 228076890 ZNF740 JASPAR yes 35890952
chr1 228076880 228076901 ZNF263 JASPAR yes 35890953
Genes associated with rs540562165[chr1:228076883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More