EnhancerDB
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  3. rs540563627[chr7:101623071]
Enhancers that have rs540563627[chr7:101623071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 101610847 101660015 enh9950
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540563627[chr7:101623071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 101623063 101623078 SCRT1 JASPAR yes 16817868
chr7 101623067 101623076 SNAI2 JASPAR yes 16817869
chr7 101623067 101623077 ID4 JASPAR yes 16817870
chr7 101623067 101623077 TCF3 JASPAR yes 16817871
chr7 101623067 101623077 TCF4 JASPAR yes 16817872
Genes associated with rs540563627[chr7:101623071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More