EnhancerDB
  1. Home
  2. SNP
  3. rs540564185[chr6:17015896]
Enhancers that have rs540564185[chr6:17015896]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17010705 17025095 enh38842
Prostate (PC-3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 17015732 17016108 vista51183
VISTA
Transcript factors that have rs540564185[chr6:17015896]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17015641 17016021 NFYB UCSC Txn Factor no Conserved 108538927
chr6 17015888 17015906 NFYA JASPAR yes 70327495
chr6 17015888 17015906 NFYA JASPAR yes 100356767
chr6 17015891 17015907 NFYA JASPAR yes 70327496
chr6 17015891 17015907 NFYA JASPAR yes 100356768
chr6 17015894 17015909 NFYB JASPAR yes 70327497
chr6 17015894 17015909 NFYB JASPAR yes 100356769
Genes associated with rs540564185[chr6:17015896], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More