EnhancerDB
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  3. rs540569889[chr19:941370]
Enhancers that have rs540569889[chr19:941370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs540569889[chr19:941370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 941359 941372 TFAP2A JASPAR yes 111984885
chr19 941359 941372 TFAP2B JASPAR yes 111984886
chr19 941359 941372 TFAP2C JASPAR yes 111984887
chr19 941367 941371 LFA1 TRANSFAC yes 111984888
chr19 941368 941378 ID4 JASPAR yes 111984889
chr19 941368 941378 TCF3 JASPAR yes 111984890
chr19 941368 941378 TCF4 JASPAR yes 111984891
chr19 941369 941378 SNAI2 JASPAR yes 111984892
chr19 941370 941375 USF2 TRANSFAC yes 111984893
Genes associated with rs540569889[chr19:941370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More