EnhancerDB
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  3. rs540581266[chr4:6281457]
Enhancers that have rs540581266[chr4:6281457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 6268725 6286910 enh21331
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs540581266[chr4:6281457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 6281444 6281458 EBF1 JASPAR yes 88031381
chr4 6281445 6281458 TFAP2A JASPAR yes 88031383
chr4 6281445 6281458 TFAP2B JASPAR yes 88031384
chr4 6281445 6281458 TFAP2C JASPAR yes 88031385
chr4 6281445 6281459 PLAG1 JASPAR yes 88031386
chr4 6281446 6281457 EBF1 JASPAR yes 88031387
chr4 6281452 6281463 NFKB1 JASPAR yes 88031388
chr4 6281453 6281457 LFA1 TRANSFAC yes 88031389
chr4 6281455 6281470 ZIC3 JASPAR yes 88031390
chr4 6281455 6281470 ZIC4 JASPAR yes 88031391
chr4 6281456 6281470 ZIC1 JASPAR yes 88031392
Genes associated with rs540581266[chr4:6281457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More