EnhancerDB
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  3. rs540584268[chr10:27899533]
Enhancers that have rs540584268[chr10:27899533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 27895205 27906135 enh67453
Stomach Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540584268[chr10:27899533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 27899114 27900354 ZNF143 GTRD no Epithelial (MCF-7) 21422927
chr10 27899129 27900742 ZNF143 GTRD no Epithelial (MCF-7) 21422928
chr10 27899219 27900832 ZNF143 GTRD no Epithelial (MCF-7) 21422929
chr10 27899330 27899994 ZNF143 GTRD no Epithelial (MCF-7) 21422930
chr10 27899413 27900006 ZNF143 GTRD no Epithelial (MCF-7) 21422931
chr10 27899421 27899944 ZNF143 GTRD no Epithelial (MCF-7) 21422932
chr10 27899435 27900049 ZNF143 GTRD no Epithelial (MCF-7) 21422933
chr10 27899438 27900013 ZNF143 GTRD no Epithelial (MCF-7) 21422934
chr10 27899517 27899538 IRF1 JASPAR yes 126190438
chr10 27899518 27899539 IRF1 JASPAR yes 126190439
chr10 27899519 27899534 STAT2 JASPAR yes 126190440
chr10 27899522 27899543 IRF1 JASPAR yes 126190441
chr10 27899523 27899538 FOXP1 JASPAR yes 126190442
chr10 27899523 27899544 IRF1 JASPAR yes 126190443
chr10 27899525 27899546 ZNF263 JASPAR yes 126190444
chr10 27899527 27899548 IRF1 JASPAR yes 126190445
chr10 27899528 27899543 FOXP1 JASPAR yes 126190446
chr10 27899528 27899549 ZNF263 JASPAR yes 126190447
chr10 27899529 27899544 STAT2 JASPAR yes 126190448
chr10 27899530 27899878 ZNF143 GTRD no Epithelial (MCF-7) 21422935
chr10 27899531 27899552 ZNF263 JASPAR yes 126190449
chr10 27899532 27899547 FOXP1 JASPAR yes 126190450
Genes associated with rs540584268[chr10:27899533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More