EnhancerDB
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  3. rs540590012[chr4:1179753]
Enhancers that have rs540590012[chr4:1179753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 1176165 1188755 enh21304
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Prostate (RWPE1) Lung Heart
Transcript factors that have rs540590012[chr4:1179753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 1179741 1179753 TAL1 JASPAR yes 87798723
chr4 1179742 1179755 ZBTB18 JASPAR yes 87798724
chr4 1179743 1179753 NEUROG2 JASPAR yes 87798725
chr4 1179743 1179755 TAL1 JASPAR yes 87798726
chr4 1179753 1179763 SP1 JASPAR yes 87798727
Genes associated with rs540590012[chr4:1179753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More