EnhancerDB
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  3. rs540594399[chr6:18021016]
Enhancers that have rs540594399[chr6:18021016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 18014566 18025616 enh38860
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
chr6 18020711 18021071 vista51205
VISTA
Transcript factors that have rs540594399[chr6:18021016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 18020999 18021017 NFYA JASPAR yes 70328560
chr6 18020999 18021017 NFYA JASPAR yes 100417954
chr6 18021001 18021019 MAFF JASPAR yes 70328561
chr6 18021001 18021019 MAFF JASPAR yes 100417955
chr6 18021009 18021020 SPDEF JASPAR yes 70328565
chr6 18021009 18021020 SPDEF JASPAR yes 100417959
chr6 18021010 18021021 FLI1 JASPAR yes 70328566
chr6 18021010 18021021 FLI1 JASPAR yes 100417960
chr6 18021011 18021018 PEA3 TRANSFAC yes 70328567
chr6 18021011 18021018 PEA3 TRANSFAC yes 100417961
chr6 18021014 18021024 GCM2 JASPAR yes 70328568
chr6 18021014 18021024 GCM2 JASPAR yes 100417962
Genes associated with rs540594399[chr6:18021016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More