EnhancerDB
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  3. rs540605730[chr19:12894730]
Enhancers that have rs540605730[chr19:12894730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12894545 12895330 vista28654
VISTA
Transcript factors that have rs540605730[chr19:12894730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12894497 12894893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849882
chr19 12894497 12894893 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386314
chr19 12894577 12894887 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108386316
chr19 12894581 12894845 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386317
chr19 12894582 12895245 EP300 UCSC Txn Factor no Conserved 108386318
chr19 12894585 12894861 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386319
chr19 12894596 12894966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849883
chr19 12894596 12894966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386320
chr19 12894629 12895052 NR3C1 UCSC Txn Factor no Conserved 108386321
chr19 12894636 12894769 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108386322
chr19 12894651 12895245 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386323
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849884
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386324
chr19 12894726 12894739 ELF1 JASPAR yes 70805992
chr19 12894726 12894739 ELF1 JASPAR yes 112493651
chr19 12894727 12894739 EHF JASPAR yes 70805993
chr19 12894727 12894739 ELF1 JASPAR yes 70805994
chr19 12894727 12894739 ELF4 JASPAR yes 70805995
chr19 12894727 12894739 EHF JASPAR yes 112493652
chr19 12894727 12894739 ELF1 JASPAR yes 112493653
chr19 12894727 12894739 ELF4 JASPAR yes 112493654
chr19 12894727 12894740 ELF3 JASPAR yes 70805996
chr19 12894727 12894740 ELF3 JASPAR yes 112493655
chr19 12894728 12894739 ELF5 JASPAR yes 70805997
chr19 12894728 12894739 ELF5 JASPAR yes 112493656
chr19 12894729 12894736 ETS1 TRANSFAC yes 70805998
chr19 12894729 12894736 ETS1 TRANSFAC yes 112493657
chr19 12894729 12894739 ETV6 JASPAR yes 70805999
chr19 12894729 12894739 GABPA JASPAR yes 70806000
chr19 12894729 12894739 ETV6 JASPAR yes 112493658
chr19 12894729 12894739 GABPA JASPAR yes 112493659
chr19 12894729 12894740 ELK4 JASPAR yes 70806001
chr19 12894729 12894740 FLI1 JASPAR yes 70806002
chr19 12894729 12894740 ELK4 JASPAR yes 112493660
chr19 12894729 12894740 FLI1 JASPAR yes 112493661
chr19 12894730 12894738 EHF JASPAR yes 70806003
chr19 12894730 12894738 FEV JASPAR yes 70806004
chr19 12894730 12894738 EHF JASPAR yes 112493662
chr19 12894730 12894738 FEV JASPAR yes 112493663
Genes associated with rs540605730[chr19:12894730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More