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- rs540625373[chr16:88303284]
Enhancers that have rs540625373[chr16:88303284]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
88291992 |
88310485 |
enh16901 |
|
|
Transcript factors that have rs540625373[chr16:88303284]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
88302300
|
88303727
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21735724
|
|
|
chr16
|
88302520
|
88304633
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21735726
|
|
|
chr16
|
88302772
|
88304701
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21735727
|
|
|
chr16
|
88303266
|
88303813
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21735728
|
|
|
chr16
|
88303277
|
88303287
|
ID4
|
JASPAR
|
yes
|
|
12272477
|
|
|
chr16
|
88303277
|
88303287
|
TCF3
|
JASPAR
|
yes
|
|
12272478
|
|
|
chr16
|
88303277
|
88303287
|
TCF4
|
JASPAR
|
yes
|
|
12272479
|
|
|
chr16
|
88303277
|
88303857
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21735729
|
|
|
chr16
|
88303278
|
88303287
|
SNAI2
|
JASPAR
|
yes
|
|
12272480
|
|
|
chr16
|
88303279
|
88303284
|
USF2
|
TRANSFAC
|
yes
|
|
12272481
|
|
Genes associated with rs540625373[chr16:88303284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |