EnhancerDB
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  3. rs540629747[chr17:39707267]
Enhancers that have rs540629747[chr17:39707267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540629747[chr17:39707267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39706647 39707282 TCF7L2 GTRD no Colon (HCT116) 21757954
chr17 39706833 39707284 ZNF143 GTRD no Epithelial (MCF-7) 21757955
chr17 39706894 39707386 ZNF143 GTRD no Epithelial (MCF-7) 21757956
chr17 39706909 39707325 ZNF143 GTRD no Epithelial (MCF-7) 21757957
chr17 39707085 39707551 ZNF274 GTRD no Bone Marrow (K562) 21757958
chr17 39707261 39707267 GATA3 JASPAR yes 54264306
Genes associated with rs540629747[chr17:39707267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More