EnhancerDB
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  3. rs540637654[chr1:31955890]
Enhancers that have rs540637654[chr1:31955890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs540637654[chr1:31955890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31954087 31957363 ZNF274 GTRD no Blood (GM12878) 107802733
chr1 31955889 31955902 DUXA JASPAR yes 27932334
chr1 31955889 31955903 ONECUT1 JASPAR yes 27932335
chr1 31955890 31955900 PAX3 JASPAR yes 27932336
chr1 31955890 31955900 PAX7 JASPAR yes 27932337
chr1 31955890 31955901 DUX4 JASPAR yes 27932338
Genes associated with rs540637654[chr1:31955890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More