EnhancerDB
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  3. rs540645075[chr1:15508468]
Enhancers that have rs540645075[chr1:15508468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs540645075[chr1:15508468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15508450 15508470 ESR1 JASPAR yes 26967815
chr1 15508453 15508473 PPARG JASPAR yes 26967816
chr1 15508454 15508472 ESR1 JASPAR yes 26967817
chr1 15508454 15508472 ESR2 JASPAR yes 26967818
chr1 15508454 15508472 NR3C1 JASPAR yes 26967819
chr1 15508455 15508470 ESR2 JASPAR yes 26967820
chr1 15508464 15508474 RORA JASPAR yes 26967821
chr1 15508466 15508478 BHLHE23 JASPAR yes 26967822
chr1 15508467 15508477 NEUROD2 JASPAR yes 26967823
chr1 15508467 15508477 OLIG2 JASPAR yes 26967824
chr1 15508467 15508477 OLIG3 JASPAR yes 26967825
Genes associated with rs540645075[chr1:15508468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More