EnhancerDB
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Enhancers that have rs540669373[chr12:93525522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 93499545 93526304 enh14896
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540669373[chr12:93525522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 93523889 93527541 ZNF143 GTRD no Epithelial (MCF-7) 21564172
chr12 93523889 93527541 ZNF143 GTRD no Epithelial (MCF-7) 21564173
chr12 93524059 93525686 ZNF143 GTRD no Epithelial (MCF-7) 21564178
chr12 93524066 93525862 ZNF143 GTRD no Epithelial (MCF-7) 21564179
chr12 93524214 93525769 ZNF143 GTRD no Epithelial (MCF-7) 21564184
chr12 93524323 93525645 ZNF143 GTRD no Epithelial (MCF-7) 21564191
chr12 93524754 93525822 ZNF143 GTRD no Epithelial (MCF-7) 21564203
chr12 93525101 93526006 ZNF143 GTRD no Epithelial (MCF-7) 21564205
chr12 93525106 93525897 ZNF274 GTRD no Bone Marrow (K562) 21564206
chr12 93525134 93525941 ZNF274 GTRD no Cervix (HeLa-S3) 21564207
chr12 93525149 93525869 ZNF143 GTRD no Epithelial (MCF-7) 21564208
chr12 93525166 93525944 ZNF274 GTRD no Bone Marrow (K562) 21564209
chr12 93525195 93525871 ZNF274 GTRD no Blood (GM12878) 21564210
chr12 93525201 93525865 ZNF274 GTRD no Blood (GM12878) 21564211
chr12 93525209 93525830 ZNF274 GTRD no Liver (HepG2) 21564212
chr12 93525249 93525826 ZNF143 GTRD no Epithelial (MCF-7) 21564213
chr12 93525252 93525701 ZNF143 GTRD no Epithelial (MCF-7) 21564214
chr12 93525262 93525679 ZNF143 GTRD no Epithelial (MCF-7) 21564215
chr12 93525264 93525788 ZNF274 GTRD no Blood (GM12878) 21564216
chr12 93525286 93525950 ZNF274 GTRD no Bone Marrow (K562) 21564217
chr12 93525290 93525734 ZNF274 GTRD no Bone Marrow (K562) 21564218
chr12 93525298 93525753 ZNF143 GTRD no Epithelial (MCF-7) 21564219
chr12 93525302 93525659 ZNF143 GTRD no Epithelial (MCF-7) 21564220
chr12 93525305 93525810 ZNF274 GTRD no Bone Marrow (K562) 21564221
chr12 93525313 93525771 ZNF274 GTRD no Blood (GM12878) 21564222
chr12 93525313 93525789 ZNF274 GTRD no Liver (HepG2) 21564223
chr12 93525314 93525810 ZNF274 GTRD no Liver (HepG2) 21564224
chr12 93525318 93525662 ZNF274 GTRD no Liver (HepG2) 21564225
chr12 93525320 93525820 ZNF143 GTRD no Epithelial (MCF-7) 21564226
chr12 93525323 93525878 ZNF143 GTRD no Epithelial (MCF-7) 21564227
chr12 93525325 93526091 ZNF274 GTRD no Bone Marrow (K562) 21564228
chr12 93525327 93525766 ZNF274 GTRD no Liver (HepG2) 21564229
chr12 93525329 93525833 ZNF274 GTRD no Bone Marrow (K562) 21564230
chr12 93525333 93525727 ZNF274 GTRD no Blood (GM12878) 21564231
chr12 93525354 93525772 ZNF274 GTRD no Bone Marrow (K562) 21564232
chr12 93525362 93525782 ZNF143 GTRD no Epithelial (MCF-7) 21564233
chr12 93525368 93525787 ZNF274 GTRD no Bone Marrow (K562) 21564234
chr12 93525368 93525801 ZNF274 GTRD no Cervix (HeLa-S3) 21564235
chr12 93525377 93525696 ZNF274 GTRD no Liver (HepG2) 21564236
chr12 93525379 93525660 ZNF274 GTRD no Bone Marrow (K562) 21564237
chr12 93525399 93525779 CTCF GTRD no Lung 21564238
chr12 93525402 93525668 ZNF274 GTRD no Bone Marrow (K562) 21564239
chr12 93525441 93525808 ZNF274 GTRD no Cervix (HeLa-S3) 21564240
chr12 93525445 93525808 ZNF274 GTRD no Bone Marrow (K562) 21564241
chr12 93525447 93525832 ZNF274 GTRD no Bone Marrow (K562) 21564242
chr12 93525449 93525875 ZNF274 GTRD no Bone Marrow (K562) 21564243
chr12 93525515 93525526 EBF1 JASPAR yes 122823388
Genes associated with rs540669373[chr12:93525522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More