EnhancerDB
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  3. rs540678881[chr17:63549138]
Enhancers that have rs540678881[chr17:63549138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63547485 63553195 enh17309
Brain (SK-N-SH) Astrocyte Placenta Uterus Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs540678881[chr17:63549138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63548708 63552928 ZNF143 GTRD no Epithelial (MCF-7) 108283676
chr17 63548708 63552928 ZNF143 GTRD no Epithelial (MCF-7) 108283677
chr17 63548783 63551465 ZNF143 GTRD no Epithelial (MCF-7) 108283678
chr17 63548905 63553336 ZNF274 GTRD no Bone Marrow (K562) 108283679
chr17 63548905 63553336 ZNF274 GTRD no Bone Marrow (K562) 108283680
chr17 63548934 63551970 ZNF274 GTRD no Bone Marrow (K562) 108283681
chr17 63548954 63551611 ZNF143 GTRD no Epithelial (MCF-7) 108283682
chr17 63549024 63551493 ZNF143 GTRD no Epithelial (MCF-7) 108283683
chr17 63549083 63551985 ZNF274 GTRD no Bone Marrow (K562) 108283684
chr17 63549099 63552213 ZNF274 GTRD no Bone Marrow (K562) 108283685
chr17 63549099 63552213 ZNF274 GTRD no Bone Marrow (K562) 108283686
chr17 63549116 63553241 ZNF274 GTRD no Blood (GM12878) 108283687
chr17 63549116 63553241 ZNF274 GTRD no Blood (GM12878) 108283688
chr17 63549120 63553048 ZNF274 GTRD no Liver (HepG2) 108283689
chr17 63549120 63553048 ZNF274 GTRD no Liver (HepG2) 108283690
chr17 63549122 63549143 IRF1 JASPAR yes 55379807
chr17 63549137 63551296 ZNF274 GTRD no Bone Marrow (K562) 108283691
Genes associated with rs540678881[chr17:63549138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More