EnhancerDB
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  3. rs540681130[chr17:77962399]
Enhancers that have rs540681130[chr17:77962399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77955405 77983735 enh17427
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs540681130[chr17:77962399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77961613 77962413 ZNF143 GTRD no Epithelial (MCF-7) 108305678
chr17 77961669 77962700 TCF7L2 UCSC Txn Factor no Conserved 108305680
chr17 77961819 77962415 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21796805
chr17 77961819 77962415 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108305684
chr17 77961876 77962500 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796806
chr17 77961876 77962500 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305686
chr17 77961930 77962414 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108305689
chr17 77961971 77962411 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796812
chr17 77961971 77962411 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305696
chr17 77961990 77962400 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108305700
chr17 77962024 77962620 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21796820
chr17 77962024 77962620 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108305706
chr17 77962061 77962625 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796825
chr17 77962061 77962625 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305712
chr17 77962065 77962455 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796827
chr17 77962065 77962455 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305714
chr17 77962076 77962700 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796828
chr17 77962076 77962700 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305715
chr17 77962090 77962426 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796829
chr17 77962090 77962426 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305716
chr17 77962125 77962501 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796831
chr17 77962125 77962501 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305718
chr17 77962142 77962562 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796833
chr17 77962142 77962562 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305720
chr17 77962161 77962477 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796834
chr17 77962161 77962477 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305721
chr17 77962177 77962513 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796836
chr17 77962177 77962513 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305723
chr17 77962234 77962454 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796837
chr17 77962234 77962454 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305724
chr17 77962280 77962470 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796838
chr17 77962280 77962470 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305725
chr17 77962395 77962405 MYF6 JASPAR yes 56234960
chr17 77962397 77962402 MYC TRANSFAC yes 56234961
Genes associated with rs540681130[chr17:77962399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More