EnhancerDB
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  3. rs540681311[chr1:26222727]
Enhancers that have rs540681311[chr1:26222727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 26213205 26226323 enh11640
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus
Transcript factors that have rs540681311[chr1:26222727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 26222719 26222735 RFX2 JASPAR yes 27612495
chr1 26222719 26222735 RFX3 JASPAR yes 27612496
chr1 26222719 26222735 RFX4 JASPAR yes 27612497
chr1 26222719 26222735 RFX5 JASPAR yes 27612498
Genes associated with rs540681311[chr1:26222727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More