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- rs540709888[chr1:54051921]
Enhancers that have rs540709888[chr1:54051921]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
54045925 |
54059092 |
enh26707 |
|
|
Transcript factors that have rs540709888[chr1:54051921]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
54051058
|
54055279
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804010
|
|
|
chr1
|
54051288
|
54055240
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804011
|
|
|
chr1
|
54051504
|
54055886
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804012
|
|
|
chr1
|
54051524
|
54054710
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107804013
|
|
|
chr1
|
54051609
|
54054952
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107804014
|
|
|
chr1
|
54051654
|
54054972
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804015
|
|
|
chr1
|
54051686
|
54055847
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804016
|
|
|
chr1
|
54051691
|
54053868
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107804017
|
|
|
chr1
|
54051701
|
54055017
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107804018
|
|
|
chr1
|
54051717
|
54052971
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107804019
|
|
|
chr1
|
54051728
|
54054125
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107804020
|
|
|
chr1
|
54051731
|
54054074
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107804021
|
|
|
chr1
|
54051743
|
54053993
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804022
|
|
|
chr1
|
54051767
|
54054138
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107804023
|
|
|
chr1
|
54051769
|
54054829
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107804024
|
|
|
chr1
|
54051770
|
54054117
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107804025
|
|
|
chr1
|
54051790
|
54052929
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107804026
|
|
|
chr1
|
54051794
|
54054885
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107804027
|
|
|
chr1
|
54051813
|
54054906
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107804028
|
|
|
chr1
|
54051818
|
54054947
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804029
|
|
|
chr1
|
54051819
|
54053588
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107804030
|
|
|
chr1
|
54051842
|
54054813
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107804031
|
|
|
chr1
|
54051858
|
54054314
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107804032
|
|
|
chr1
|
54051867
|
54054743
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804033
|
|
|
chr1
|
54051872
|
54054070
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107804034
|
|
|
chr1
|
54051873
|
54054699
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804035
|
|
|
chr1
|
54051877
|
54054827
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107804036
|
|
|
chr1
|
54051884
|
54054752
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804037
|
|
|
chr1
|
54051886
|
54054822
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804038
|
|
|
chr1
|
54051900
|
54054836
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804039
|
|
|
chr1
|
54051901
|
54055117
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107804040
|
|
|
chr1
|
54051906
|
54053936
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107804041
|
|
Genes associated with rs540709888[chr1:54051921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |