EnhancerDB
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  3. rs540716311[chr2:30730814]
Enhancers that have rs540716311[chr2:30730814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30724225 30739812 enh5388
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Muscle (A673) Thyroid Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs540716311[chr2:30730814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30730812 30730827 SCRT1 JASPAR yes 72776147
chr2 30730813 30730823 FIGLA JASPAR yes 72776148
chr2 30730813 30730823 ID4 JASPAR yes 72776149
chr2 30730813 30730823 MSC JASPAR yes 72776150
chr2 30730813 30730823 MYF6 JASPAR yes 72776151
chr2 30730813 30730823 TCF3 JASPAR yes 72776152
chr2 30730813 30730823 TCF4 JASPAR yes 72776153
chr2 30730814 30730823 SNAI2 JASPAR yes 72776154
Genes associated with rs540716311[chr2:30730814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More