EnhancerDB
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  3. rs540772677[chr17:71339974]
Enhancers that have rs540772677[chr17:71339974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71332212 71342792 enh17362
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs540772677[chr17:71339974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71339336 71340006 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291290
chr17 71339957 71339974 RARA JASPAR yes 55863774
chr17 71339973 71339981 GATA3 JASPAR yes 55863776
chr17 71339973 71339981 GATA5 JASPAR yes 55863777
Genes associated with rs540772677[chr17:71339974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More