EnhancerDB
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  3. rs540778936[chr1:27035287]
Enhancers that have rs540778936[chr1:27035287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27017585 27036395 enh166
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7) Stomach Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540778936[chr1:27035287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27035281 27035291 SREBF2 JASPAR yes 27651172
Genes associated with rs540778936[chr1:27035287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More