EnhancerDB
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  3. rs540796090[chr10:30788668]
Enhancers that have rs540796090[chr10:30788668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30772685 30803635 enh1155
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540796090[chr10:30788668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30788119 30788913 ZNF274 GTRD no Bone Marrow (K562) 21425904
chr10 30788654 30788668 TCF7L2 JASPAR yes 126405084
chr10 30788654 30788669 LEF1 JASPAR yes 126405085
chr10 30788658 30788671 ELF1 JASPAR yes 126405086
chr10 30788659 30788680 IRF1 JASPAR yes 126405087
chr10 30788661 30788671 GABPA JASPAR yes 126405088
chr10 30788661 30788682 ZNF263 JASPAR yes 126405089
chr10 30788663 30788678 PRDM1 JASPAR yes 126405091
chr10 30788664 30788685 ZNF263 JASPAR yes 126405092
chr10 30788665 30788686 IRF1 JASPAR yes 126405093
chr10 30788668 30788689 ZNF263 JASPAR yes 126405094
Genes associated with rs540796090[chr10:30788668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More