EnhancerDB
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  3. rs540805566[chr17:78990300]
Enhancers that have rs540805566[chr17:78990300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78989925 79003875 enh17432
Prostate (RWPE1) Blood (T-cell) Esophagus Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs540805566[chr17:78990300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78990283 78991248 TCF7L2 GTRD no Colon (HCT116) 21797470
chr17 78990289 78990310 IRF1 JASPAR yes 56297182
Genes associated with rs540805566[chr17:78990300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More