EnhancerDB
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  3. rs540818568[chr2:38691223]
Enhancers that have rs540818568[chr2:38691223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38686664 38704695 enh48250
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Stomach Colon (HCT116) Thyroid Lung (PC-9) Breast Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540818568[chr2:38691223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38691208 38691223 FOXP1 JASPAR yes 73144162
chr2 38691212 38691227 FOXP1 JASPAR yes 73144164
chr2 38691215 38691226 FOXP2 JASPAR yes 73144165
chr2 38691220 38691235 SOX21 JASPAR yes 73144166
Genes associated with rs540818568[chr2:38691223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More