EnhancerDB
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  3. rs540827613[chr2:235377322]
Enhancers that have rs540827613[chr2:235377322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235366405 235380795 enh19344
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs540827613[chr2:235377322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235377314 235377323 NFIX JASPAR yes 81881894
chr2 235377315 235377324 HIC2 JASPAR yes 81881895
chr2 235377316 235377322 NFIC JASPAR yes 81881896
chr2 235377319 235377328 RUNX2 JASPAR yes 81881897
chr2 235377319 235377329 RUNX3 JASPAR yes 81881898
Genes associated with rs540827613[chr2:235377322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More