EnhancerDB
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  3. rs540836686[chr1:52130557]
Enhancers that have rs540836686[chr1:52130557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52122845 52134475 enh26695
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs540836686[chr1:52130557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52130546 52130558 IRF1 JASPAR yes 28861164
chr1 52130547 52130562 MEF2A JASPAR yes 28861165
chr1 52130548 52130563 MEF2C JASPAR yes 28861166
chr1 52130549 52130561 MEF2D JASPAR yes 28861167
Genes associated with rs540836686[chr1:52130557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More