EnhancerDB
  1. Home
  2. SNP
  3. rs540843562[chr8:123688207]
Enhancers that have rs540843562[chr8:123688207]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 123686285 123709975 enh41518
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs540843562[chr8:123688207]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 123688194 123688210 POU4F3 JASPAR yes 47989923
chr8 123688196 123688210 POU4F1 JASPAR yes 47989927
chr8 123688207 123688211 YY1 TRANSFAC yes 47989928
Genes associated with rs540843562[chr8:123688207], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More