EnhancerDB
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  3. rs540849877[chr1:232683334]
Enhancers that have rs540849877[chr1:232683334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232678305 232695982 enh27614
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Astrocyte Lung Blood (OCI-LY7) Stomach Muscle (Myoblast) Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs540849877[chr1:232683334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232683316 232683336 RREB1 JASPAR yes 36169772
chr1 232683318 232683338 RREB1 JASPAR yes 36169774
chr1 232683320 232683340 RREB1 JASPAR yes 36169775
chr1 232683322 232683342 RREB1 JASPAR yes 36169776
chr1 232683323 232683343 RREB1 JASPAR yes 36169777
chr1 232683327 232683337 SP1 JASPAR yes 36169779
chr1 232683327 232683341 PLAG1 JASPAR yes 36169780
chr1 232683328 232683342 PLAG1 JASPAR yes 36169781
chr1 232683328 232683349 ZNF263 JASPAR yes 36169782
chr1 232683332 232683342 ZNF740 JASPAR yes 36169783
chr1 232683332 232683352 RREB1 JASPAR yes 36169784
chr1 232683333 232683343 ZNF740 JASPAR yes 36169785
Genes associated with rs540849877[chr1:232683334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More