EnhancerDB
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  3. rs540853663[chr6:18351333]
Enhancers that have rs540853663[chr6:18351333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 18333303 18355574 enh8984
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 18350965 18351333 vista51217
VISTA
Transcript factors that have rs540853663[chr6:18351333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 18351329 18351341 GRHL1 JASPAR yes 70329390
chr6 18351329 18351341 GRHL1 JASPAR yes 100434905
chr6 18351330 18351340 TFCP2 JASPAR yes 70329391
chr6 18351330 18351340 TFCP2 JASPAR yes 100434906
Genes associated with rs540853663[chr6:18351333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More