EnhancerDB
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  3. rs540855480[chr6:28834536]
Enhancers that have rs540855480[chr6:28834536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 28828749 28855295 enh49071
Bone Marrow (K562) Large Intestine Blood (T-cell) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Uterus Thymus
chr6 28834475 28834586 vista51486
VISTA
Transcript factors that have rs540855480[chr6:28834536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 28833198 28834850 POLR2A UCSC Txn Factor no Conserved 108539429
chr6 28834272 28834625 PHF8 UCSC Txn Factor no Conserved 108539430
chr6 28834528 28834540 ZBTB7A JASPAR yes 70341567
chr6 28834528 28834540 ZBTB7A JASPAR yes 100986860
chr6 28834529 28834541 GLI2 JASPAR yes 70341569
chr6 28834529 28834541 GLI2 JASPAR yes 100986862
chr6 28834534 28834546 EHF JASPAR yes 70341570
chr6 28834534 28834546 ELF4 JASPAR yes 70341571
chr6 28834534 28834546 EHF JASPAR yes 100986863
chr6 28834534 28834546 ELF4 JASPAR yes 100986864
chr6 28834535 28834546 SPDEF JASPAR yes 70341572
chr6 28834535 28834546 SPDEF JASPAR yes 100986865
Genes associated with rs540855480[chr6:28834536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More