EnhancerDB
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  3. rs540862079[chr16:29626478]
Enhancers that have rs540862079[chr16:29626478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540862079[chr16:29626478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29626006 29626546 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21703114
chr16 29626118 29626538 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703116
chr16 29626195 29626585 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703122
chr16 29626199 29626575 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703123
chr16 29626250 29626610 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703125
chr16 29626271 29626531 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703126
chr16 29626273 29626563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703127
chr16 29626309 29626649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703128
chr16 29626310 29626570 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703129
chr16 29626345 29626661 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21703130
chr16 29626472 29626487 NR2C2 JASPAR yes 10269278
chr16 29626473 29626487 RXRG JASPAR yes 10269279
Genes associated with rs540862079[chr16:29626478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More