EnhancerDB
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  3. rs540883542[chr4:114563003]
Enhancers that have rs540883542[chr4:114563003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 114547985 114569854 enh8156
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540883542[chr4:114563003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 114562998 114563013 MEF2C JASPAR yes 92179937
chr4 114562999 114563014 MEF2A JASPAR yes 92179938
chr4 114563000 114563012 MEF2B JASPAR yes 92179939
chr4 114563000 114563012 MEF2D JASPAR yes 92179940
Genes associated with rs540883542[chr4:114563003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More