EnhancerDB
  1. Home
  2. SNP
  3. rs540897183[chr12:51217851]
Enhancers that have rs540897183[chr12:51217851]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51216025 51222415 enh2350
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540897183[chr12:51217851]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51216743 51218810 ZNF143 GTRD no Epithelial (MCF-7) 21545308
chr12 51216795 51218833 ZNF143 GTRD no Epithelial (MCF-7) 21545309
chr12 51216885 51218671 ZNF143 GTRD no Epithelial (MCF-7) 21545312
chr12 51216972 51218788 ZNF143 GTRD no Epithelial (MCF-7) 21545315
chr12 51216992 51218814 ZNF143 GTRD no Epithelial (MCF-7) 21545318
chr12 51217053 51218327 ZNF274 GTRD no Cervix (HeLa-S3) 21545328
chr12 51217065 51218625 ZNF274 GTRD no Liver (HepG2) 21545329
chr12 51217088 51218860 ZNF143 GTRD no Epithelial (MCF-7) 21545332
chr12 51217564 51218733 ZNF143 GTRD no Epithelial (MCF-7) 21545341
chr12 51217594 51218548 ZNF274 GTRD no Liver (HepG2) 21545342
chr12 51217649 51219231 ZNF274 GTRD no Liver (HepG2) 21545343
chr12 51217683 51219238 ZNF274 GTRD no Liver (HepG2) 21545344
chr12 51217716 51218657 ZNF143 GTRD no Epithelial (MCF-7) 21545345
chr12 51217721 51219247 ZNF143 GTRD no Epithelial (MCF-7) 21545346
chr12 51217739 51219875 ZNF274 GTRD no Liver (HepG2) 21545347
chr12 51217743 51218760 ZNF143 GTRD no Epithelial (MCF-7) 21545348
chr12 51217754 51218341 ZNF274 GTRD no Cervix (HeLa-S3) 21545349
chr12 51217759 51219128 ZNF274 GTRD no Cervix (HeLa-S3) 21545350
chr12 51217772 51218607 ZNF274 GTRD no Liver (HepG2) 21545351
chr12 51217783 51218672 ZNF143 GTRD no Epithelial (MCF-7) 21545352
chr12 51217787 51218659 ZNF274 GTRD no Liver (HepG2) 21545353
chr12 51217790 51219221 ZNF143 GTRD no Epithelial (MCF-7) 21545354
chr12 51217802 51218684 ZNF274 GTRD no Cervix (HeLa-S3) 21545355
chr12 51217806 51219745 ZNF274 GTRD no Liver (HepG2) 21545356
chr12 51217807 51218292 ZNF274 GTRD no Liver (HepG2) 21545357
chr12 51217813 51218769 ZNF274 GTRD no Cervix (HeLa-S3) 21545358
chr12 51217819 51218462 ZNF143 GTRD no Epithelial (MCF-7) 21545359
chr12 51217825 51219135 ZNF143 GTRD no Epithelial (MCF-7) 21545360
chr12 51217836 51218668 ZNF143 GTRD no Epithelial (MCF-7) 21545361
chr12 51217842 51218858 ZNF143 GTRD no Epithelial (MCF-7) 21545362
chr12 51217847 51218340 ZNF274 GTRD no Liver (HepG2) 21545363
chr12 51217849 51217865 POU4F2 JASPAR yes 120864153
chr12 51217849 51217865 POU4F3 JASPAR yes 120864154
chr12 51217851 51217865 POU4F1 JASPAR yes 120864155
Genes associated with rs540897183[chr12:51217851], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More