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- rs540905589[chr17:41796887]
Enhancers that have rs540905589[chr17:41796887]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
41793937 |
41803674 |
enh44429 |
|
|
| chr17 |
41796772 |
41797488 |
vista24856 |
|
|
Transcript factors that have rs540905589[chr17:41796887]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
41795590
|
41796937
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261590
|
|
|
chr17
|
41796558
|
41797219
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261598
|
|
|
chr17
|
41796877
|
41796893
|
SOX4
|
JASPAR
|
yes
|
|
21241963
|
|
|
chr17
|
41796877
|
41796893
|
SOX8
|
JASPAR
|
yes
|
|
21241964
|
|
|
chr17
|
41796877
|
41796893
|
SOX4
|
JASPAR
|
yes
|
|
54370520
|
|
|
chr17
|
41796877
|
41796893
|
SOX8
|
JASPAR
|
yes
|
|
54370521
|
|
Genes associated with rs540905589[chr17:41796887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |