EnhancerDB
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  3. rs540912341[chr17:79026550]
Enhancers that have rs540912341[chr17:79026550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs540912341[chr17:79026550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79023785 79028001 AR GTRD no Prostate (PC-3) 21797581
chr17 79023785 79028001 AR GTRD no Prostate (PC-3) 108308442
chr17 79026537 79026552 STAT2 JASPAR yes 56301623
chr17 79026538 79026552 STAT1 JASPAR yes 56301625
chr17 79026545 79026556 E2F6 JASPAR yes 56301626
chr17 79026549 79026559 ZNF740 JASPAR yes 56301627
Genes associated with rs540912341[chr17:79026550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More