EnhancerDB
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  3. rs540938397[chr16:85509500]
Enhancers that have rs540938397[chr16:85509500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540938397[chr16:85509500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85507921 85509953 ZNF143 GTRD no Epithelial (MCF-7) 21726404
chr16 85508248 85509977 ZNF143 GTRD no Epithelial (MCF-7) 21726405
chr16 85508352 85509944 ZNF143 GTRD no Epithelial (MCF-7) 21726409
chr16 85508792 85510027 ZNF143 GTRD no Epithelial (MCF-7) 21726422
chr16 85509317 85510294 ZNF274 GTRD no Bone Marrow (K562) 21726428
chr16 85509499 85509503 YY1 TRANSFAC yes 12066493
chr16 85509500 85509513 ZBTB18 JASPAR yes 12066494
Genes associated with rs540938397[chr16:85509500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More