EnhancerDB
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  3. rs540945659[chr19:864565]
Enhancers that have rs540945659[chr19:864565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 858228 870935 enh86290
Colon (HCT116) Uterus Stomach
Transcript factors that have rs540945659[chr19:864565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 861344 864664 TCF7L2 GTRD no Colon (HCT116) 21830142
chr19 861344 864664 TCF7L2 GTRD no Colon (HCT116) 108347099
chr19 861598 864625 ZNF274 GTRD no Blood (GM12878) 108347101
chr19 862383 864623 ZNF274 GTRD no Bone Marrow (K562) 108347104
chr19 862453 864622 ZNF274 GTRD no Blood (GM12878) 108347105
chr19 862539 866536 ZBTB33 GTRD no Brain (SK-N-SH) 108347106
chr19 863472 864633 ZNF143 GTRD no Epithelial (MCF-7) 108347108
chr19 863475 864662 ZNF143 GTRD no Epithelial (MCF-7) 108347109
chr19 863578 864595 ZNF274 GTRD no Blood (GM12878) 108347111
chr19 863586 864805 TCF7L2 GTRD no Colon (HCT116) 21830143
chr19 863586 864805 TCF7L2 GTRD no Colon (HCT116) 108347112
chr19 863613 864589 ZNF274 GTRD no Blood (GM12878) 108347116
chr19 863674 864613 ZNF274 GTRD no Liver (HepG2) 108347124
chr19 863685 864626 ZNF274 GTRD no Blood (GM12878) 108347134
chr19 863763 864622 TCF7L2 GTRD no Colon (HCT116) 21830146
chr19 863763 864622 TCF7L2 GTRD no Colon (HCT116) 108347158
chr19 863935 864631 ZBTB33 GTRD no Lung (A549) 108347257
chr19 864553 864567 PLAG1 JASPAR yes 111980059
chr19 864560 864565 SP1 TRANSFAC yes 111980060
chr19 864561 864566 SP1 TRANSFAC yes 111980061
chr19 864561 864570 THAP1 JASPAR yes 111980062
chr19 864564 864568 LFA1 TRANSFAC yes 111980063
Genes associated with rs540945659[chr19:864565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More