EnhancerDB
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  3. rs540952297[chr3:58460981]
Enhancers that have rs540952297[chr3:58460981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58452985 58463300 enh7254
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540952297[chr3:58460981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58460968 58460981 HSF1 JASPAR yes 2699161
chr3 58460968 58460981 HSF2 JASPAR yes 2699162
chr3 58460968 58460981 HSF4 JASPAR yes 2699163
chr3 58460978 58460993 LEF1 JASPAR yes 2699164
chr3 58460979 58460993 TCF7L2 JASPAR yes 2699165
Genes associated with rs540952297[chr3:58460981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More