EnhancerDB
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  3. rs540967981[chr19:1171565]
Enhancers that have rs540967981[chr19:1171565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1159608 1173238 enh17838
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Placenta Thyroid Uterus Stomach
Transcript factors that have rs540967981[chr19:1171565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 21831465
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350492
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350493
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350494
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350495
chr19 1168039 1171629 ZNF274 GTRD no Cervix (HeLa-S3) 21831466
chr19 1168039 1171629 ZNF274 GTRD no Cervix (HeLa-S3) 108350496
chr19 1168039 1171629 ZNF274 GTRD no Cervix (HeLa-S3) 108350497
chr19 1168196 1171623 ZBTB33 GTRD no Lung (A549) 108350501
chr19 1168196 1171623 ZBTB33 GTRD no Lung (A549) 108350502
chr19 1168844 1171619 ZNF143 GTRD no Epithelial (MCF-7) 108350525
chr19 1168844 1171619 ZNF143 GTRD no Epithelial (MCF-7) 108350526
chr19 1168874 1172383 ZNF143 GTRD no Epithelial (MCF-7) 108350530
chr19 1168874 1172383 ZNF143 GTRD no Epithelial (MCF-7) 108350531
chr19 1168874 1172383 ZNF143 GTRD no Epithelial (MCF-7) 108350532
chr19 1169611 1171667 ZNF274 GTRD no Bone Marrow (K562) 21831478
chr19 1169611 1171667 ZNF274 GTRD no Bone Marrow (K562) 108350554
chr19 1169611 1171667 ZNF274 GTRD no Bone Marrow (K562) 108350555
chr19 1169836 1171735 ZNF274 GTRD no Bone Marrow (K562) 21831498
chr19 1169836 1171735 ZNF274 GTRD no Bone Marrow (K562) 108350594
chr19 1169836 1171735 ZNF274 GTRD no Bone Marrow (K562) 108350595
chr19 1169856 1172226 ZNF143 GTRD no Epithelial (MCF-7) 108350606
chr19 1169856 1172226 ZNF143 GTRD no Epithelial (MCF-7) 108350607
chr19 1169856 1172226 ZNF143 GTRD no Epithelial (MCF-7) 108350608
chr19 1170501 1171573 ZNF274 GTRD no Blood (GM12878) 108350671
chr19 1170534 1171574 ZNF274 GTRD no Blood (GM12878) 108350673
chr19 1170775 1171574 ZNF274 GTRD no Blood (GM12878) 108350677
chr19 1171058 1171926 ZNF274 GTRD no Liver (HepG2) 108350686
chr19 1171074 1172157 ZNF143 GTRD no Epithelial (MCF-7) 108350688
chr19 1171074 1172157 ZNF143 GTRD no Epithelial (MCF-7) 108350689
chr19 1171079 1171763 ZNF274 GTRD no Liver (HepG2) 108350690
chr19 1171098 1171578 ZNF274 GTRD no Bone Marrow (K562) 21831539
chr19 1171098 1171578 ZNF274 GTRD no Bone Marrow (K562) 108350691
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350692
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350693
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350694
chr19 1171141 1171875 ZNF274 GTRD no Liver (HepG2) 108350696
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 21831541
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 108350698
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 108350699
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 21831542
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 108350700
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 108350701
chr19 1171252 1174691 TCF7L2 GTRD no Colon (HCT116) 108350702
chr19 1171252 1174691 TCF7L2 GTRD no Colon (HCT116) 108350703
chr19 1171279 1172125 TCF7L2 GTRD no Colon (HCT116) 108350704
chr19 1171302 1172024 ZNF274 GTRD no Liver (HepG2) 108350705
chr19 1171345 1172476 ZNF143 GTRD no Epithelial (MCF-7) 108350706
chr19 1171384 1175424 TCF7L2 GTRD no Colon (HCT116) 108350707
chr19 1171384 1175424 TCF7L2 GTRD no Colon (HCT116) 108350708
chr19 1171427 1174756 TCF7L2 GTRD no Colon (HCT116) 108350709
chr19 1171427 1174756 TCF7L2 GTRD no Colon (HCT116) 108350710
chr19 1171560 1171574 PLAG1 JASPAR yes 111997877
chr19 1171561 1171566 SP1 TRANSFAC yes 111997878
Genes associated with rs540967981[chr19:1171565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More